P A U P * Version 4.0b10 for 32-bit Microsoft Windows Thu May 26 11:56:54 2005 -----------------------------NOTICE----------------------------- This is a beta-test version. Please report any crashes, apparent calculation errors, or other anomalous results. There are no restrictions on publication of results obtained with this version, but you should check the WWW site frequently for bug announcements and/or updated versions. See the README file on the distribution media for details. ---------------------------------------------------------------- !!!!!!!MODELTEST HERE!!!!!!!!!!!! Note: Outgroup status not changed by Outgroup or Ingroup command. Optimality criterion set to distance. Heuristic search settings: Optimality criterion = distance (minimum evolution) Negative branch lengths allowed, but set to zero for tree-score calculation Distance measure = general time-reversible Rates assumed to follow gamma distribution with shape parameter = 1.3023 Starting tree(s) obtained via neighbor-joining Branch-swapping algorithm: tree-bisection-reconnection (TBR) Steepest descent option not in effect Initial 'MaxTrees' setting = 100 Zero-length branches not collapsed 'MulTrees' option in effect Topological constraints not enforced Trees are unrooted NOTE: Random-addition-sequence option is ignored when starting trees are obtained using neighbor-joining. Heuristic search completed Total number of rearrangements tried = 13168 Score of best tree(s) found = 1.08513 Number of trees retained = 1 Time used = 0.45 sec Processing of file "C:\Documents and Settings\user\Os meus documentos\Postdoc\Batch Files\PAUP batch files\minimum evolution.nex" completed. Processing of file "C:\Documents and Settings\user\Os meus documentos\Postdoc\Polytomies\Analise\minimum evolution.nex" begins...